I'm leaving these links here so I don't forget them (again?) they've both been around for a while and I'm wondering if I forgot, or if our field just has a lot of software!
You can check out MZmine 2 here. (now I can close that tab -- WAY too many are open!)
And Mass++ is here. P.S. PubMed thinks + signs mean something else and doesn't like searching it as text.
Both are free -- look super powerful -- and are waiting on my desktop for me to bring my PC into a hyperbolic time chamber.
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