UCSF has brought us tons of great mass spec resources over the years. The first that pops out in my head is the great protein prospector.
What if you are new to proteomics or are considering moving your biological problem over to allow proteomics to take a look? UCSF hosts a great presentation by Dr. Chris Walsh that provides a clear and thorough overview into PTMs and their analysis by mass spec.
You can kind the original presentation here.
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