Shoutout to @PastelBio for bringing attention to another great resource in this amazing catalog of stuff we can use!
We've been making some serious progress in the area of software to use once you've got that quantitative protein list.
ClueGO is another nice entry in the category. It is a plug in for CytoScape that allows you to directly use data you're already using within that interface, or to pull in formatted text files from other programs. The visualization interface is focused on user-customization and allows you to display your findings in ways that help you to find the patterns hidden in that big list.
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