...cause somebody really did ask for it...if you've got TMT11-plex reagent on the way and are using PD 1.4, you'll need to add a channel, or download this template from my DropBox.
DISCLAIMERS:
1) Tandem Mass Tags are the trademark property of Proteome Sciences. I'd put trademarks every time I mention these reagents on the blog, but I don't have access to symbols without using HTML.
2) I'm not a professional mass spectrometrist
3) This looks like it works fine. No promises, though!
4) I totally made up the mass in the average mass box for the method. You've got to use HRAM to even use the TMT11-plex reagent, so I figure it doesn't matter. I took the difference between the C and N average masses in the box for the other reagents, and added that to the average for the original 131 reagent. No promises.
5) Use at your own risk!
re Proteome Sciences trademarks
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