Sunday, June 19, 2022

Find the genomic variants that make it to peptides -- with MaxQuant!


Step by step instructions for how to do something -- in MaxQuant?!? That's great! 

Step by step instructions on how to do something really really hard in MaxQuant?!? That is somehow even better! 

Genomic data has just as many stupid formats as we do, but their files are often bigger. I've built a couple of proteomics studies from crappy sequencing data on repositories and I can't remember what the difference between a .fasq or a .bum is without looking them up. Chances are I'll just download the wrong one and will realize it is wrong when I can't convert it. 

It's all here! 


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